Capthist

Author: wsvr

August undefined, 2024

WebOct 23, 2024 · The function read.capthist forms a 'traps' object from the detector layout data and saves it as an attribute, along with capture data read from another file, in a 'capthist' object. By default, a habitat mask is generated automatically by secr.fit using a specified buffer around the detectors (traps). http://www.phidot.org/forum/viewtopic.php?f=36&t=2953

secr/make.capthist.R at master · cran/secr · GitHub

WebApr 5, 2010 · A capthist is primarily an array of values with dim (capthist) = c (nc, noccasions, ntraps) where nc is the number of detected individuals. Values maybe binary … Webmake.grid, sim.popn, sim.capthist, secr.fit costing Cost of SECR design Description The cost of implementing a spatially explicit capture–recapture design depends on the detector layout, the number of detections and the various unit costs. Usage suzaku sa

make.capthist: Construct capthist Object in secr: Spatially …

Webmake.capthist requires that the data for captures and traps already exist as R objects. To read data from external (text) files, first use read.table and read.traps, or try read.capthist … Webreduce.capthist may be used with non-spatial capthist objects (NULL 'traps' attribute) by setting verify = FALSE. Value. reduce.traps – An object of class traps with detectors combined according to newtraps or span. The new object has an attribute ‘newtrap’, a vector of length equal to the original number of detectors. Websecr-package 5 summary.mask . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .277 summary.popn ... suzaku\\u0027s

secr: Spatially Explicit Capture-Recapture

Capthist

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WebNov 17, 2024 · 3: In make.capthist (captures = capturelist [ [i]], traps = trps, fmt = fmt, : dropping repeat detections within occasions at exclusive detectors (traps) There should be 18 detectors associated with each session (G01, G02, ... G12), but they are each showing all 198 detectors used throughout the season. Code: Select all WebOct 9, 2024 · split generates a list in which each component is a capthist object. Each component corresponds to a level of f. Multi-session capthists are accepted in secr >= 4.4.0; f should then be a list of factors with one component per session and the same levels in all. To combine (pool) occasions use reduce.capthist.

WebhareCH6 <-read.capthist("hareCH6capt.txt", "hareCH6trap.txt", detector = "single") ## No errors found :-) The capthist object hareCH6 now contains almost all the information we need to ﬁt a model. However, before launching into that it’s good to take a deep breath and examine the raw data. Exploring the data WebApr 5, 2010 · For sim.capthist, an object of class capthist, a 3-dimensional array with additional attributes. Rows represent individuals and columns represent occasions; the …

http://www.phidot.org/forum/viewtopic.php?f=36&t=3890 WebApr 5, 2010 · make.capthist is the most flexible way to prepare data for secr.fit. See read.capthist for a more streamlined way to read data from text files for common …

WebMar 31, 2024 · An object of class capthist (a matrix or array of detection data with attributes for detector positions etc.). For ‘single’ and ‘multi’ detectors this is a matrix with one row …

WebApr 5, 2010 · For sim.capthist, an object of class capthist, a 3-dimensional array with additional attributes. Rows represent individuals and columns represent occasions; the third dimension, codes the number of detections at each detector (zero or one for trap detectors (‘single’, ‘multi’) and binary proximity detectors. ... bargain mansions tamara day legsWebca·tas·tro·phism. n. 1. a. The doctrine that major changes in the earth's crust result from sudden catastrophes, such as the impact of a large meteor, rather than from gradual … suzaku sushiWebSpatially Explicit Capture–Recapture Description Estimate animal population density with data from an array of passive detectors (traps) by fitting a spatial detection model by maximizing the likelihood. Data must have been assembled as an object of class capthist. Integration is by summation over the grid of points in mask . Usage suzaku\u0027s flame-kissed rodWebOct 1, 2024 · Re: read.capthist help -- covariates. I think you have 6 columns of detector covariates, and each needs a name. Also, use only one '/' per line. Five detector covariates are later defined as a single time-varying covariate. I tried this with a modified 'trap.txt' file below and it worked. suzaku\u0027s flame-kissed greatbowWebMay 2, 2010 · secr / R / make.capthist.R Go to file Go to file T; Go to line L; Copy path Copy permalink; This commit does not belong to any branch on this repository, and may … suzaku\u0027s flame kissed greataxeWebApr 5, 2010 · A capthist is primarily an array of values with dim (capthist) = c (nc, noccasions, ntraps) where nc is the number of detected individuals. Values maybe binary ( {–1, 0, 1}) or integer depending on the detector type. Deaths during the experiment are represented as negative values. bargain mansions tamara day religionWebApr 5, 2010 · capthist object with the requested subset of observations, or a list of such objects (i.e., a multi-session capthist object). List input results in list output, except when a single session is selected. Arguments x object of class capthist subset vector of subscripts to select rows (individuals) (see Details for variations) occasions suzaku sunate